CDS

Accession Number TCMCG006C75672
gbkey CDS
Protein Id XP_013699235.1
Location join(30174222..30174237,30174372..30174522,30174591..30174688,30175041..30175102,30175187..30175278,30175371..30175494,30175591..30175677,30175882..30175975,30176318..30176425,30176520..30176620,30176904..30176969,30177051..30177138,30177260..30177320,30177431..30177629)
Gene LOC106402957
GeneID 106402957
Organism Brassica napus

Protein

Length 448aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013843781.2
Definition E3 ubiquitin-protein ligase CHFR-like isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category O
Description Zinc finger, C3HC4 type (RING finger)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10644        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000075        [VIEW IN EMBL-EBI]
GO:0000166        [VIEW IN EMBL-EBI]
GO:0000209        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007093        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009896        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016605        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0030162        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031331        [VIEW IN EMBL-EBI]
GO:0031396        [VIEW IN EMBL-EBI]
GO:0031398        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031401        [VIEW IN EMBL-EBI]
GO:0031647        [VIEW IN EMBL-EBI]
GO:0031648        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032434        [VIEW IN EMBL-EBI]
GO:0032436        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042176        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045732        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045862        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061136        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901800        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1903050        [VIEW IN EMBL-EBI]
GO:1903052        [VIEW IN EMBL-EBI]
GO:1903320        [VIEW IN EMBL-EBI]
GO:1903322        [VIEW IN EMBL-EBI]
GO:1903362        [VIEW IN EMBL-EBI]
GO:1903364        [VIEW IN EMBL-EBI]
GO:2000058        [VIEW IN EMBL-EBI]
GO:2000060        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGACGGAATCAGTTCCGTTGGACACTAGATTCTCTGACATCAAGATTAGGTGTGGTGATATGGTGATATGCTCCGAGATTAAACCATCTTCCTCAGAAAGACATGAATGGTGCAGAATCACTAAGAACTTGGGTCAAGGCTCTGCCACTTTACATAACAAAAGTTCGGATGCTATACTTGTTGACGAGGCTCTCATCCCCAAAGATGGTGCTGTTGATATCATCTCTGGTTCCGAAATTGTTCCTGGCCCTGGAGGACAAGGTTACTTGCAGTACAGATTTACGGTAATGCCTGCTCCAGATTCAAGATCCCAGCTACTTAAGATCTCCATAGATCCTGACCACGCTAAATGCAGTATCTGCTTAAACGTGTGGCATGATGTTGTCACAGCTGCGCCTTGCCTTCATAATTTCTGTAATGGCTGTTTCTCAGAATGGATGCGGAGATCTGAGGCGAGACATCAGCATGTGCTGTGTCCACAGTGCAGAACAACTGTACAGTTTGTTGGGAGGAATCATTTCCTGCAAAACATACAAGAGGATATATTGAAAGCGGATACCGGACTGAGGCGGCCAGCTGAAGATCTCGCAGTGTTGGACTCATCTTCATCAATACAATCGAATCTTATCATTGGGAGTAAGAGAAAACGTCGTTTCAGTACGTTAGTCTCGCCCACACTTGAAGAAAGAGATAGCTTGCGTTTGCAATGTCCACAATGTGTTGCTACGATTGGTGGCTATCGGTGTGAACGACATGGTGCACACCTGCAATGCCACCTGTGTAGAGGAATGATGCCTAATAGAACCAATATTCAAGTGCCGTTACACTGCATGGGATGTGATAGGCCGTTTTGTGGTGCTTATTGGAGTTCCCAAAATGTTACACATGGTGAATCTACTCCAGTCTGCAATCCGGAAACTTTCAGACCTATCTCGGAACGCACAGCTACAAGGATTCCCTTCCTAACCCATGAAATGAATCGCCATGAACAAGATATAACACAAAGATGCATTGCTAAGATGGGAAGAACCGTGCAGGATGTTGTAGCTGAGTGGTTCAGTCTTTTCAACGATAGACAAATCGACCGCTCTCGAATGCCACTCAATCATGCTGAGACAATAACTACATCAACACATGTCTGCAATGAGTGTTATGATAAGCTGGTGGGGTTCCTTTTATACTGGTTCCGGGTAACGCTTATCGTAGATTATTTTCCAGCTGATGCAGCAGCGAGAGAAAATTGTTGGTACGGGTACGCGTGTAGGACACAGCACCACAACGAAGAACATGCTCGTAAACGTAACCATGTGTGTCGTCCTACTAGAGGGAACCATCCCTCTTAG
Protein:  
MTTESVPLDTRFSDIKIRCGDMVICSEIKPSSSERHEWCRITKNLGQGSATLHNKSSDAILVDEALIPKDGAVDIISGSEIVPGPGGQGYLQYRFTVMPAPDSRSQLLKISIDPDHAKCSICLNVWHDVVTAAPCLHNFCNGCFSEWMRRSEARHQHVLCPQCRTTVQFVGRNHFLQNIQEDILKADTGLRRPAEDLAVLDSSSSIQSNLIIGSKRKRRFSTLVSPTLEERDSLRLQCPQCVATIGGYRCERHGAHLQCHLCRGMMPNRTNIQVPLHCMGCDRPFCGAYWSSQNVTHGESTPVCNPETFRPISERTATRIPFLTHEMNRHEQDITQRCIAKMGRTVQDVVAEWFSLFNDRQIDRSRMPLNHAETITTSTHVCNECYDKLVGFLLYWFRVTLIVDYFPADAAARENCWYGYACRTQHHNEEHARKRNHVCRPTRGNHPS